Inheritance diagram for SphereManager:

Collaboration diagram for SphereManager:

Public Member Functions
override void	Init ()

override void	DestroyAll ()

override void	ToggleDistanceCueing (bool enabling)

override void	EnableRenderers ()

override void	DisableRenderers ()

override void	EnableShadows ()

override void	DisableShadows ()

override void	SetColor (Color col, List< string > atom, string residue="All", string chain="All")

override void	SetColor (Color col, int atomNum)

override void	SetRadii (List< string > atom, string residue="All", string chain="All")

override void	SetRadii (int id)

Color	GetColor (Vector3 pos)

override GameObject	GetBall (int id)

override void	ResetRadii ()

void	CreateMouseOversIMDSimulation ()

void	DestroyMouseOversIMDSimulation ()

override void	ResetPositions ()

override void	ResetIMDSimulationPositions ()

SingleAtomSelection	getClosestAtomGameObject (Vector3 position)

override void	showHydrogens (bool hide)

Static Public Attributes
static GameObject[]	sphereGameObjects

Private Member Functions
void	ResetColors ()

void	Update ()

Private Attributes
BallUpdateSphere[]	balls

Additional Inherited Members
Public Attributes inherited from GenericManager
bool	isInit = false

Detailed Description

Definition at line 9 of file SphereManager.cs.

Member Function Documentation

void SphereManager.CreateMouseOversIMDSimulation ( )

Creates the mouse overs, needed when an IMD simulation and mouse interaction are required

Implements GenericAtomManager.

Definition at line 436 of file SphereManager.cs.

References MouseOverMoleculeIMDSimulation.setAtomId().

Referenced by EnableRenderers().

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override void SphereManager.DestroyAll ( )

virtual

Implements GenericManager.

Definition at line 24 of file SphereManager.cs.

References GenericManager.isInit.

Referenced by Molecule.View.DisplayMolecule.DestroyAllAtomsAndBonds().

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void SphereManager.DestroyMouseOversIMDSimulation ( )

Destroys the mouse overs

Implements GenericAtomManager.

Definition at line 446 of file SphereManager.cs.

Referenced by DisableRenderers().

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override void SphereManager.DisableRenderers ( )

virtual

Disables the renderers for all objects managed by the instance of the manager.

Implements GenericManager.

Definition at line 59 of file SphereManager.cs.

References UI.UIData.atomtype, DestroyMouseOversIMDSimulation(), and UI.GUIMoleculeController.toggle_IMD.

Referenced by Update().

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override void SphereManager.DisableShadows ( )

virtual

Implements GenericManager.

Definition at line 79 of file SphereManager.cs.

override void SphereManager.EnableRenderers ( )

virtual

Enables the renderers for all objects managed by the instance of the manager.

Implements GenericManager.

Definition at line 42 of file SphereManager.cs.

References Molecule.Model.MoleculeModel.atomsLocationlist, CreateMouseOversIMDSimulation(), UI.UIData.guided, BallUpdate.number, UnityMolMain.setCurrentAtomManager(), and UI.GUIMoleculeController.toggle_IMD.

Referenced by Molecule.View.DisplayMolecule.ChangeRepresentation().

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override void SphereManager.EnableShadows ( )

virtual

Implements GenericManager.

Definition at line 73 of file SphereManager.cs.

override GameObject SphereManager.GetBall ( int id )

virtual

Gets the GameObject from balls at the position "id".

Returns: The ball.

Parameters

id	Identifier.

Implements GenericManager.

Definition at line 415 of file SphereManager.cs.

SingleAtomSelection SphereManager.getClosestAtomGameObject ( Vector3 position )

Implements GenericAtomManager.

Definition at line 483 of file SphereManager.cs.

References SingleAtomSelection.go, BallUpdate.number, and SingleAtomSelection.pdbIndex.

Color SphereManager.GetColor ( Vector3 pos )

Gets the color of the atom at the location "pos".

Returns: The color.

Parameters

pos Position.

Definition at line 399 of file SphereManager.cs.

override void SphereManager.Init ( )

virtual

Initializes this sphere manager.

Implements GenericManager.

Definition at line 16 of file SphereManager.cs.

References GenericManager.isInit, BallUpdate.resetColors, and BallUpdate.resetRadii.

Referenced by Molecule.View.DisplayAtom.AtomSphereStyle.DisplayAtoms().

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void SphereManager.ResetColors ( )

private

Resets the colors of all spheres and sticks.

Uses the colors sets in BallUpdateSphere.

Definition at line 90 of file SphereManager.cs.

References Molecule.Model.MoleculeModel.atomsColorList, UI.UIData.atomtype, BallUpdate.bondsReadyToBeReset, BallUpdate.number, and BallUpdate.resetColors.

Referenced by Update().

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override void SphereManager.ResetIMDSimulationPositions ( )

virtual

Implements GenericManager.

Definition at line 475 of file SphereManager.cs.

References Molecule.Model.MoleculeModel.atomsIMDSimulationLocationlist.

override void SphereManager.ResetPositions ( )

virtual

Implements GenericManager.

Definition at line 466 of file SphereManager.cs.

References Molecule.Model.MoleculeModel.atomsLocationlist.

override void SphereManager.ResetRadii ( )

virtual

Implements GenericManager.

Definition at line 419 of file SphereManager.cs.

References Molecule.Model.MoleculeModel.atomsLocalScaleList, Molecule.Model.MoleculeModel.atomsTypelist, UI.UIData.atomtype, RepresentationOldGUI.globalRadius, BallUpdate.number, BallUpdate.oldRadiusFactor, BallUpdate.oldrayonFactor, BallUpdate.radiusFactor, BallUpdate.rayonFactor, and BallUpdate.resetRadii.

Referenced by Update().

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override void SphereManager.SetColor	(	Color	col,
		List< string >	atom,
		string	residue = `"All"`,
		string	chain = `"All"`
	)

virtual

Sets the color of atoms.

Parameters

col	Color.
atom	Atom type.
residue	Residue.
chain	Chain.

Implements GenericManager.

Definition at line 117 of file SphereManager.cs.

References Molecule.Model.MoleculeModel.atomsChainList, Molecule.Model.MoleculeModel.atomsColorList, Molecule.Model.MoleculeModel.atomsNamelist, Molecule.Model.MoleculeModel.atomsResnamelist, BallUpdate.number, UI.GUIDisplay.quickSelection, and BallUpdate.resetColors.

override void SphereManager.SetColor	(	Color	col,
		int	atomNum
	)

virtual

Sets the color of a specific atom.

Parameters

atomNum	Atom number.
col	Color.

Implements GenericManager.

Definition at line 245 of file SphereManager.cs.

References Molecule.Model.MoleculeModel.atomsColorList, BallUpdate.number, and BallUpdate.resetColors.

override void SphereManager.SetRadii	(	List< string >	atom,
		string	residue = `"All"`,
		string	chain = `"All"`
	)

virtual

Changes the scale of the atoms.

Parameters

atom	Atom type.
residue	Residue.
chain	Chain.

Implements GenericManager.

Definition at line 266 of file SphereManager.cs.

References Molecule.Model.MoleculeModel.atomsChainList, Molecule.Model.MoleculeModel.atomsLocalScaleList, Molecule.Model.MoleculeModel.atomsNamelist, Molecule.Model.MoleculeModel.atomsResnamelist, BallUpdate.bondsReadyToBeReset, UI.GUIDisplay.newScale, BallUpdate.number, UI.GUIDisplay.quickSelection, and BallUpdate.resetRadii.

override void SphereManager.SetRadii ( int id )

virtual

Changes the scale for Atom selection.

Parameters

id	Identifier of the selected atom.

Implements GenericManager.

Definition at line 381 of file SphereManager.cs.

References Molecule.Model.MoleculeModel.atomsLocalScaleList, BallUpdate.bondsReadyToBeReset, UI.GUIDisplay.newScale, BallUpdate.number, and BallUpdate.resetRadii.

override void SphereManager.showHydrogens ( bool hide )

virtual

Implements GenericManager.

Definition at line 505 of file SphereManager.cs.

override void SphereManager.ToggleDistanceCueing ( bool enabling )

virtual

Implements GenericManager.

Definition at line 37 of file SphereManager.cs.

void SphereManager.Update ( )

private

Definition at line 453 of file SphereManager.cs.

References UI.UIData.atomtype, DisableRenderers(), UI.UIData.isFileLoaded, BallUpdate.oldRadiusFactor, BallUpdate.radiusFactor, BallUpdate.resetColors, ResetColors(), BallUpdate.resetRadii, and ResetRadii().

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Member Data Documentation

BallUpdateSphere [] SphereManager.balls

private

Definition at line 10 of file SphereManager.cs.

GameObject [] SphereManager.sphereGameObjects

static

Definition at line 11 of file SphereManager.cs.

Referenced by Molecule.View.DisplayAtom.AtomSphereStyle.DisplayAtomMethodBySphere().

The documentation for this class was generated from the following file:

Assets/Scripts/Molecule/View/SphereManager.cs

Public Member Functions

Static Public Attributes

Private Member Functions

Private Attributes

Additional Inherited Members

Detailed Description

Member Function Documentation

Member Data Documentation