Inheritance diagram for CubeManager:

Collaboration diagram for CubeManager:

Public Member Functions
override void	Init ()

override void	DestroyAll ()

override void	ToggleDistanceCueing (bool enabling)

override void	SetColor (Color col, List< string > atom, string residue="All", string chain="All")

override void	SetColor (Color col, int atomNum)

override void	SetRadii (List< string > atom, string residue="All", string chain="All")

override void	SetRadii (int id)

Color	GetColor (Vector3 pos)

override GameObject	GetBall (int id)

override void	DisableRenderers ()

override void	EnableRenderers ()

override void	EnableShadows ()

override void	DisableShadows ()

override void	ResetRadii ()

void	CreateMouseOversIMDSimulation ()

void	DestroyMouseOversIMDSimulation ()

override void	ResetPositions ()

override void	ResetIMDSimulationPositions ()

SingleAtomSelection	getClosestAtomGameObject (Vector3 position)

override void	showHydrogens (bool hide)

Static Public Attributes
static GameObject[]	cubeGameObjects

Private Member Functions
void	ResetColors ()

void	Update ()

Private Attributes
BallUpdateCube[]	cubes

Additional Inherited Members
Public Attributes inherited from GenericManager
bool	isInit = false

Detailed Description

Definition at line 9 of file CubeManager.cs.

Member Function Documentation

void CubeManager.CreateMouseOversIMDSimulation ( )

Creates the mouse overs, needed when IMD simulation and mouse interaction are required.

Implements GenericAtomManager.

Definition at line 420 of file CubeManager.cs.

References MouseOverMoleculeIMDSimulation.setAtomId().

Referenced by EnableRenderers().

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override void CubeManager.DestroyAll ( )

virtual

Implements GenericManager.

Definition at line 21 of file CubeManager.cs.

References GenericManager.isInit.

Referenced by Molecule.View.DisplayMolecule.DestroyAllAtomsAndBonds().

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void CubeManager.DestroyMouseOversIMDSimulation ( )

Destroys the mouse overs

Implements GenericAtomManager.

Definition at line 430 of file CubeManager.cs.

Referenced by DisableRenderers().

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override void CubeManager.DisableRenderers ( )

virtual

Disables the renderers for all objects managed by the instance of the manager.

Implements GenericManager.

Definition at line 365 of file CubeManager.cs.

References UI.UIData.atomtype, DestroyMouseOversIMDSimulation(), and UI.GUIMoleculeController.toggle_IMD.

Referenced by Update().

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override void CubeManager.DisableShadows ( )

virtual

Implements GenericManager.

Definition at line 397 of file CubeManager.cs.

override void CubeManager.EnableRenderers ( )

virtual

Enables the renderers for all objects managed by the instance of the manager.

Implements GenericManager.

Definition at line 378 of file CubeManager.cs.

References CreateMouseOversIMDSimulation(), UnityMolMain.setCurrentAtomManager(), and UI.GUIMoleculeController.toggle_IMD.

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override void CubeManager.EnableShadows ( )

virtual

Implements GenericManager.

Definition at line 391 of file CubeManager.cs.

override GameObject CubeManager.GetBall ( int id )

virtual

Gets the GameObject from cubes at the position "id".

Returns: The ball.

Parameters

id	Identifier .

Implements GenericManager.

Definition at line 361 of file CubeManager.cs.

SingleAtomSelection CubeManager.getClosestAtomGameObject ( Vector3 position )

Implements GenericAtomManager.

Definition at line 470 of file CubeManager.cs.

References SingleAtomSelection.go, BallUpdate.number, and SingleAtomSelection.pdbIndex.

Color CubeManager.GetColor ( Vector3 pos )

Gets the color of the atom at the location "pos".

Returns: The color.

Parameters

pos Position.

Definition at line 345 of file CubeManager.cs.

override void CubeManager.Init ( )

virtual

Initializes this instance of the manager.

Implements GenericManager.

Definition at line 13 of file CubeManager.cs.

References GenericManager.isInit, BallUpdate.resetColors, and BallUpdate.resetRadii.

Referenced by Molecule.View.DisplayAtom.AtomCubeStyle.DisplayAtomCube().

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void CubeManager.ResetColors ( )

private

Resets the colors of all cubes and sticks.

Uses the color sets in BallUpdateCube.

Definition at line 37 of file CubeManager.cs.

References Molecule.Model.MoleculeModel.atomsColorList, UI.UIData.atomtype, BallUpdate.bondsReadyToBeReset, BallUpdate.number, and BallUpdate.resetColors.

Referenced by Update().

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override void CubeManager.ResetIMDSimulationPositions ( )

virtual

Implements GenericManager.

Definition at line 462 of file CubeManager.cs.

References Molecule.Model.MoleculeModel.atomsIMDSimulationLocationlist.

override void CubeManager.ResetPositions ( )

virtual

Implements GenericManager.

Definition at line 453 of file CubeManager.cs.

References Molecule.Model.MoleculeModel.atomsLocationlist.

override void CubeManager.ResetRadii ( )

virtual

Implements GenericManager.

Definition at line 404 of file CubeManager.cs.

References Molecule.Model.MoleculeModel.atomsLocalScaleList, Molecule.Model.MoleculeModel.atomsTypelist, UI.UIData.atomtype, RepresentationOldGUI.globalRadius, BallUpdate.number, BallUpdate.oldRadiusFactor, BallUpdate.radiusFactor, and BallUpdate.resetRadii.

Referenced by Update().

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override void CubeManager.SetColor	(	Color	col,
		List< string >	atom,
		string	residue = `"All"`,
		string	chain = `"All"`
	)

virtual

Sets the color of atoms.

Parameters

col	Color.
atom	Atom type.
residue	Residue.
chain	Chain.

Implements GenericManager.

Definition at line 63 of file CubeManager.cs.

References Molecule.Model.MoleculeModel.atomsChainList, Molecule.Model.MoleculeModel.atomsColorList, Molecule.Model.MoleculeModel.atomsNamelist, Molecule.Model.MoleculeModel.atomsResnamelist, BallUpdate.number, UI.GUIDisplay.quickSelection, and BallUpdate.resetColors.

override void CubeManager.SetColor	(	Color	col,
		int	atomNum
	)

virtual

Sets the color of a specific atom.

Parameters

atomNum	Atom number.
col	Color.

Implements GenericManager.

Definition at line 192 of file CubeManager.cs.

References Molecule.Model.MoleculeModel.atomsColorList, BallUpdate.number, and BallUpdate.resetColors.

override void CubeManager.SetRadii	(	List< string >	atom,
		string	residue = `"All"`,
		string	chain = `"All"`
	)

virtual

Changes the scale of the atoms.

Parameters

atom	Atom type.
residue	Residue.
chain	Chain.

Implements GenericManager.

Definition at line 212 of file CubeManager.cs.

References Molecule.Model.MoleculeModel.atomsChainList, Molecule.Model.MoleculeModel.atomsLocalScaleList, Molecule.Model.MoleculeModel.atomsNamelist, Molecule.Model.MoleculeModel.atomsResnamelist, BallUpdate.bondsReadyToBeReset, UI.GUIDisplay.newScale, BallUpdate.number, UI.GUIDisplay.quickSelection, and BallUpdate.resetRadii.

override void CubeManager.SetRadii ( int id )

virtual

Changes the scale for Atom selection.

Parameters

id	Identifier of the selected atom.

Implements GenericManager.

Definition at line 327 of file CubeManager.cs.

References Molecule.Model.MoleculeModel.atomsLocalScaleList, BallUpdate.bondsReadyToBeReset, UI.GUIDisplay.newScale, BallUpdate.number, and BallUpdate.resetRadii.

override void CubeManager.showHydrogens ( bool hide )

virtual

Implements GenericManager.

Definition at line 494 of file CubeManager.cs.

override void CubeManager.ToggleDistanceCueing ( bool enabling )

virtual

Implements GenericManager.

Definition at line 30 of file CubeManager.cs.

void CubeManager.Update ( )

private

Definition at line 437 of file CubeManager.cs.

References UI.UIData.atomtype, DisableRenderers(), UI.UIData.isFileLoaded, BallUpdate.oldRadiusFactor, BallUpdate.radiusFactor, ResetColors(), BallUpdate.resetColors, BallUpdate.resetRadii, and ResetRadii().

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Member Data Documentation

GameObject [] CubeManager.cubeGameObjects

static

Definition at line 11 of file CubeManager.cs.

Referenced by Molecule.View.DisplayAtom.AtomCubeStyle.DisplayAtomCube().

BallUpdateCube [] CubeManager.cubes

private

Definition at line 10 of file CubeManager.cs.

The documentation for this class was generated from the following file:

Assets/Scripts/Molecule/View/CubeManager.cs

Public Member Functions

Static Public Attributes

Private Member Functions

Private Attributes

Additional Inherited Members

Detailed Description

Member Function Documentation

Member Data Documentation