Inheritance diagram for HBallMeshManager:

Collaboration diagram for HBallMeshManager:

Public Member Functions
override void	Init ()

override void	DestroyAll ()

override void	ToggleDistanceCueing (bool enabling)

override void	SetColor (Color col, List< string > atom, string residue="All", string chain="All")

override void	SetColor (Color col, int atomNum)

override void	SetRadii (List< string > atom, string residue="All", string chain="All")

override void	SetRadii (int id)

void	SetTexture (Texture texture)

void	SetTexture (string resource_name)

override GameObject	GetBall (int id)

override void	ResetPositions ()

override void	ResetIMDSimulationPositions ()

override void	DisableRenderers ()

override void	EnableRenderers ()

override void	EnableShadows ()

override void	DisableShadows ()

void	SetBrightness (float val)

void	ResetBrightness ()

override void	ResetRadii ()

void	ResetShininess ()

void	ApplyTextures ()

override void	showHydrogens (bool hide)

void	hideAtom (int idAtom, bool show)

void	ResetVisibility ()

SingleAtomSelection	getClosestAtomGameObject (Vector3 position)

void	CreateMouseOversIMDSimulation ()

void	DestroyMouseOversIMDSimulation ()

Public Attributes
GameObject[]	hball_meshes = new GameObject[0]

GameObject[]	collidersGO

Dictionary< int, KeyValuePair< int, int > >	coordAtomTexture

Material[]	materialsAtoms

Texture2D[]	texturesAtoms

Material[]	materialsSticks

GameObject	collidersParent

Public Attributes inherited from GenericManager
bool	isInit = false

Static Public Attributes
static int	selectionAtoms

static float	brightness = 1.0f

static float	shininess = 0.0f

static bool	resetBrightness = false

static bool	resetRadii = false

static bool	resetShininess = false

static float	scaleAtoms = 1.0f

Private Member Functions
void	Update ()

Private Attributes
List< int >	texturesToUpdate

Detailed Description

Definition at line 11 of file HBallMeshManager.cs.

Member Function Documentation

void HBallMeshManager.ApplyTextures ( )

Definition at line 618 of file HBallMeshManager.cs.

Referenced by SugarManager.Hide_No_Sugar_Hyperballs(), ResetIMDSimulationPositions(), ResetPositions(), ResetRadii(), ResetVisibility(), SetColor(), SugarManager.show_HyperBalls_Sugar(), and showHydrogens().

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void HBallMeshManager.CreateMouseOversIMDSimulation ( )

Implements GenericAtomManager.

Definition at line 689 of file HBallMeshManager.cs.

References MouseOverMoleculeIMDSimulation.setAtomId().

Referenced by EnableRenderers().

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override void HBallMeshManager.DestroyAll ( )

virtual

Disable and destroys all the Hyperballs

Implements GenericManager.

Definition at line 48 of file HBallMeshManager.cs.

References GenericManager.isInit.

Referenced by Molecule.View.DisplayMolecule.DestroyAllAtomsAndBonds().

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void HBallMeshManager.DestroyMouseOversIMDSimulation ( )

Implements GenericAtomManager.

Definition at line 697 of file HBallMeshManager.cs.

Referenced by DisableRenderers().

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override void HBallMeshManager.DisableRenderers ( )

virtual

Disables the renderers for the entire set of balls and sticks.

Implements GenericManager.

Definition at line 525 of file HBallMeshManager.cs.

References DestroyMouseOversIMDSimulation(), and UI.GUIMoleculeController.toggle_IMD.

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override void HBallMeshManager.DisableShadows ( )

virtual

Implements GenericManager.

Definition at line 562 of file HBallMeshManager.cs.

override void HBallMeshManager.EnableRenderers ( )

virtual

Enables the renderers for the entire set of balls and sticks.

Implements GenericManager.

Definition at line 542 of file HBallMeshManager.cs.

References CreateMouseOversIMDSimulation(), UnityMolMain.setCurrentAtomManager(), and UI.GUIMoleculeController.toggle_IMD.

Referenced by Molecule.View.DisplayMolecule.ChangeRepresentation(), and Molecule.View.DisplayAtom.AtomMeshStyle.DisplayAtoms().

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override void HBallMeshManager.EnableShadows ( )

virtual

Implements GenericManager.

Definition at line 555 of file HBallMeshManager.cs.

override GameObject HBallMeshManager.GetBall ( int id )

virtual

Gets the GameObject from hballs at the position "id".

Returns: The ball.

Parameters

id	Identifier.

Implements GenericManager.

Definition at line 461 of file HBallMeshManager.cs.

References Molecule.Model.MoleculeModel.atoms.

SingleAtomSelection HBallMeshManager.getClosestAtomGameObject ( Vector3 position )

Implements GenericAtomManager.

Definition at line 686 of file HBallMeshManager.cs.

void HBallMeshManager.hideAtom	(	int	idAtom,
		bool	show
	)

Definition at line 646 of file HBallMeshManager.cs.

Referenced by SugarManager.Hide_No_Sugar_Hyperballs(), and SugarManager.show_HyperBalls_Sugar().

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override void HBallMeshManager.Init ( )

virtual

Initalizes this instance.

Implements GenericManager.

Definition at line 33 of file HBallMeshManager.cs.

References GenericManager.isInit, and UnityMolMain.setCurrentAtomManager().

Referenced by Molecule.View.DisplayAtom.AtomCubeStyle.DisplayAtomCube(), and Molecule.View.DisplayAtom.AtomMeshStyle.DisplayAtoms().

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void HBallMeshManager.ResetBrightness ( )

Definition at line 574 of file HBallMeshManager.cs.

References HStickManager.resetBrightness, and HStickMeshManager.resetBrightness.

Referenced by Update().

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override void HBallMeshManager.ResetIMDSimulationPositions ( )

virtual

Resets the positions of all balls.

(Useful after interactive mode)

Implements GenericManager.

Definition at line 500 of file HBallMeshManager.cs.

References ApplyTextures(), Molecule.Model.MoleculeModel.atomsIMDSimulationLocationlist, Molecule.Model.MoleculeModel.atomsNamelist, and EncodeFloatToColor.EncodeFloatRGBA().

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override void HBallMeshManager.ResetPositions ( )

virtual

Resets the positions of all balls.

(Useful after interactive mode)

Implements GenericManager.

Definition at line 473 of file HBallMeshManager.cs.

References ApplyTextures(), Molecule.Model.MoleculeModel.atomsLocationlist, Molecule.Model.MoleculeModel.atomsNamelist, and EncodeFloatToColor.EncodeFloatRGBA().

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override void HBallMeshManager.ResetRadii ( )

virtual

Implements GenericManager.

Definition at line 583 of file HBallMeshManager.cs.

References HStickManager.adjustRadii, ApplyTextures(), Molecule.Model.MoleculeModel.atomsLocalScaleList, Molecule.Model.MoleculeModel.atomsNamelist, Molecule.Model.MoleculeModel.atomsTypelist, EncodeFloatToColor.EncodeFloatRGBA(), RepresentationOldGUI.globalRadius, and HStickMeshManager.resetRadii.

Referenced by Update().

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void HBallMeshManager.ResetShininess ( )

Definition at line 608 of file HBallMeshManager.cs.

References HStickManager.resetShininess, HStickMeshManager.resetShininess, HStickManager.shininess, shininess, and HStickMeshManager.shininess.

Referenced by Update().

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void HBallMeshManager.ResetVisibility ( )

Definition at line 657 of file HBallMeshManager.cs.

References ApplyTextures(), and Molecule.Model.MoleculeModel.atomsNamelist.

Referenced by SugarManager.Hide_No_Sugar_Hyperballs(), and SugarManager.show_HyperBalls_Sugar().

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void HBallMeshManager.SetBrightness ( float val )

Definition at line 571 of file HBallMeshManager.cs.

override void HBallMeshManager.SetColor	(	Color	col,
		List< string >	atom,
		string	residue = `"All"`,
		string	chain = `"All"`
	)

virtual

Sets the color of atoms.

Parameters

col	Color.
atom	Atom type.
residue	Residue.
chain	Chain.

Implements GenericManager.

Definition at line 87 of file HBallMeshManager.cs.

References ApplyTextures(), Molecule.Model.MoleculeModel.atomsChainList, Molecule.Model.MoleculeModel.atomsColorList, Molecule.Model.MoleculeModel.atomsNamelist, Molecule.Model.MoleculeModel.atomsResnamelist, Molecule.Model.MoleculeModel.atomsTypelist, UI.GUIDisplay.quickSelection, HStickMeshManager.resetColors, and Molecule.Model.AtomModel.type.

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override void HBallMeshManager.SetColor	(	Color	col,
		int	atomNum
	)

virtual

Sets the color of a specific atom.

(Atom selection)

Parameters

col	Color.
atomNum	Atom number.

Implements GenericManager.

Definition at line 285 of file HBallMeshManager.cs.

References ApplyTextures(), Molecule.Model.MoleculeModel.atomsColorList, Molecule.Model.MoleculeModel.atomsTypelist, and HStickMeshManager.resetColors.

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override void HBallMeshManager.SetRadii	(	List< string >	atom,
		string	residue = `"All"`,
		string	chain = `"All"`
	)

virtual

Changes the scale of the atoms.

Parameters

atom	Atom type.
residue	Residue.
chain	Chain.

Implements GenericManager.

Definition at line 319 of file HBallMeshManager.cs.

References Molecule.Model.MoleculeModel.atomsLocalScaleList, Molecule.Model.MoleculeModel.atomsNamelist, and UI.GUIDisplay.newScale.

override void HBallMeshManager.SetRadii ( int id )

virtual

Changes the scale for Atom selection.

Parameters

id	Identifier of the selected atom.

Implements GenericManager.

Definition at line 434 of file HBallMeshManager.cs.

void HBallMeshManager.SetTexture ( Texture texture )

Definition at line 438 of file HBallMeshManager.cs.

References HStickMeshManager.resetTexture, and HStickMeshManager.texture.

Referenced by SetTexture().

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void HBallMeshManager.SetTexture ( string resource_name )

Definition at line 445 of file HBallMeshManager.cs.

References SetTexture().

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override void HBallMeshManager.showHydrogens ( bool hide )

virtual

Implements GenericManager.

Definition at line 628 of file HBallMeshManager.cs.

References ApplyTextures(), Molecule.Model.MoleculeModel.atomsNamelist, and Molecule.Model.MoleculeModel.atomsTypelist.

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override void HBallMeshManager.ToggleDistanceCueing ( bool enabling )

virtual

Implements GenericManager.

Definition at line 64 of file HBallMeshManager.cs.

void HBallMeshManager.Update ( )

private

Definition at line 670 of file HBallMeshManager.cs.

References ResetBrightness(), ResetRadii(), and ResetShininess().

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Member Data Documentation

float HBallMeshManager.brightness = 1.0f

static

Definition at line 21 of file HBallMeshManager.cs.

Referenced by RepresentationOldGUI.AtomMenu(), and AtomsGUI.Brightness().

GameObject [] HBallMeshManager.collidersGO

Definition at line 14 of file HBallMeshManager.cs.

Referenced by Molecule.View.DisplayAtom.AtomMeshStyle.DisplayAtoms().

GameObject HBallMeshManager.collidersParent

Definition at line 27 of file HBallMeshManager.cs.

Referenced by Molecule.View.DisplayAtom.AtomMeshStyle.DisplayAtoms().

Dictionary<int,KeyValuePair<int,int> > HBallMeshManager.coordAtomTexture

Definition at line 17 of file HBallMeshManager.cs.

Referenced by Molecule.View.DisplayAtom.AtomMeshStyle.DisplayAtoms().

GameObject [] HBallMeshManager.hball_meshes = new GameObject[0]

Definition at line 13 of file HBallMeshManager.cs.

Referenced by Molecule.View.DisplayAtom.AtomMeshStyle.DisplayAtoms().

Material [] HBallMeshManager.materialsAtoms

Definition at line 18 of file HBallMeshManager.cs.

Material [] HBallMeshManager.materialsSticks

Definition at line 20 of file HBallMeshManager.cs.

bool HBallMeshManager.resetBrightness = false

static

Definition at line 23 of file HBallMeshManager.cs.

Referenced by RepresentationOldGUI.AtomMenu(), and AtomsGUI.Brightness().

bool HBallMeshManager.resetRadii = false

static

Definition at line 24 of file HBallMeshManager.cs.

Referenced by AtomsGUI.Radius(), RepresentationOldGUI.RenderingParameters(), and Molecule3D.Update().

bool HBallMeshManager.resetShininess = false

static

Definition at line 25 of file HBallMeshManager.cs.

Referenced by RepresentationOldGUI.RenderingParameters().

float HBallMeshManager.scaleAtoms = 1.0f

static

Definition at line 26 of file HBallMeshManager.cs.

int HBallMeshManager.selectionAtoms

static

Definition at line 15 of file HBallMeshManager.cs.

float HBallMeshManager.shininess = 0.0f

static

Definition at line 22 of file HBallMeshManager.cs.

Referenced by RepresentationOldGUI.RenderingParameters(), and ResetShininess().

Texture2D [] HBallMeshManager.texturesAtoms

Definition at line 19 of file HBallMeshManager.cs.

List<int> HBallMeshManager.texturesToUpdate

private

Definition at line 16 of file HBallMeshManager.cs.

The documentation for this class was generated from the following file:

Assets/Scripts/Molecule/View/HBallMeshManager.cs

Public Member Functions

Public Attributes

Static Public Attributes

Private Member Functions

Private Attributes

Detailed Description

Member Function Documentation

Member Data Documentation