ParseData.ParsePDB.RequestPDB Class Reference

Inheritance diagram for ParseData.ParsePDB.RequestPDB:

Collaboration diagram for ParseData.ParsePDB.RequestPDB:

Public Member Functions
	RequestPDB ()
IEnumerator	LoadJsonWWW (string file_name, Vector3 Offset)
IEnumerator	LoadOBJWWW (string file_name)
void	LoadXMLRequest (string file_name)
void	LoadPDBReaction (string resource_name)
void	LoadAnimTop (string resource_name)
void	LoadAnimCrd (string resource_name)
void	LoadXGMML (string file_name)
void	ReadXGMML (String xml_content)

Static Public Member Functions
static List< int >	sortResIndex (List< string > resChainList)

Public Attributes
float	progress =0.0f
bool	Loading = true

Static Public Attributes
static bool	isDone =false

Private Member Functions
void	Start ()
void	Update ()
void	ReadPDBReaction (TextReader sr, string resource_name)
void	ReadAnimTop (TextReader sr, string resource_name)
void	ReadAnimCrd (TextReader sr, string resource_name)
void	LoadChoice (int a)

Private Attributes
bool	wantobj =false
bool	wantdx =false
bool	wantjson =false

Detailed Description

Definition at line 83 of file RequestPDB.cs.

Constructor & Destructor Documentation

ParseData.ParsePDB.RequestPDB.RequestPDB

(

)

Definition at line 109 of file RequestPDB.cs.

Member Function Documentation

void ParseData.ParsePDB.RequestPDB.LoadAnimCrd

(

string

resource_name

)

Definition at line 207 of file RequestPDB.cs.

Referenced by Molecule3D.loadFile().

Here is the caller graph for this function:

void ParseData.ParsePDB.RequestPDB.LoadAnimTop

(

string

resource_name

)

Definition at line 197 of file RequestPDB.cs.

Referenced by Molecule3D.loadFile().

Here is the caller graph for this function:

void ParseData.ParsePDB.RequestPDB.LoadChoice ( int  a )

private

Definition at line 767 of file RequestPDB.cs.

References UI.GUIDisplay.file_base_name.

IEnumerator ParseData.ParsePDB.RequestPDB.LoadJsonWWW	(	string	file_name,
		Vector3	Offset
	)

Loads the json WW.

Returns

The json WW.

Parameters

file_name	File_name.
Offset	Offset.

Definition at line 124 of file RequestPDB.cs.

References Molecule.Model.MoleculeModel.FieldLineList, and ParseData.ParsePDB.ReadJson.ReadFile().

Here is the call graph for this function:

IEnumerator ParseData.ParsePDB.RequestPDB.LoadOBJWWW

(

string

file_name

)

Definition at line 145 of file RequestPDB.cs.

References OBJ.Load().

Here is the call graph for this function:

void ParseData.ParsePDB.RequestPDB.LoadPDBReaction

(

string

resource_name

)

Definition at line 187 of file RequestPDB.cs.

Referenced by Molecule3D.loadFile().

Here is the caller graph for this function:

void ParseData.ParsePDB.RequestPDB.LoadXGMML

(

string

file_name

)

Definition at line 516 of file RequestPDB.cs.

Referenced by Molecule3D.loadFile().

Here is the caller graph for this function:

void ParseData.ParsePDB.RequestPDB.LoadXMLRequest

(

string

file_name

)

Definition at line 162 of file RequestPDB.cs.

void ParseData.ParsePDB.RequestPDB.ReadAnimCrd ( TextReader  sr, string  resource_name  )

private

Definition at line 423 of file RequestPDB.cs.

References Molecule.Model.Reaction.acount, Molecule.Model.Reaction.affichage, Molecule.Model.Reaction.animation, Molecule.Model.MoleculeModel.atomsLocationlist, Molecule.Control.ControlMolecule.BuildMoleculeComponents(), Molecule.Model.Reaction.Catomscount, Molecule.Model.Reaction.CatomsIndList, Molecule.Model.MoleculeModel.CatomsLocationlist, Molecule.Model.Reaction.coord, Molecule.Model.Reaction.count, Molecule.Control.ControlMolecule.CreateSplines(), Molecule.Model.Reaction.current, Molecule.Model.Reaction.forward, UI.UIData.isParticlesInitialized, Molecule.Model.Reaction.isReaction, Molecule.Model.Reaction.isReady, Molecule.Model.MoleculeModel.networkLoaded, Molecule.Model.MoleculeModel.Offset, and Molecule.Model.Reaction.top.

Here is the call graph for this function:

void ParseData.ParsePDB.RequestPDB.ReadAnimTop ( TextReader  sr, string  resource_name  )

private

Definition at line 308 of file RequestPDB.cs.

References Molecule.Model.Reaction.acount, Molecule.Model.MoleculeModel.atomsColorList, Molecule.Model.MoleculeModel.atomsNamelist, Molecule.Model.MoleculeModel.atomsResnamelist, Molecule.Model.MoleculeModel.atomsTypelist, Molecule.Model.AtomModel.baseColor, Molecule.Model.MoleculeModel.BFactorList, Molecule.Model.MoleculeModel.CaSplineChainList, Molecule.Model.Reaction.Catomscount, Molecule.Model.Reaction.CatomsIndList, UI.UIData.ffType, Molecule.Model.MoleculeModel.GetAtomColor(), Molecule.Model.AtomModel.GetModel(), and Molecule.Model.Reaction.top.

Here is the call graph for this function:

void ParseData.ParsePDB.RequestPDB.ReadPDBReaction ( TextReader  sr, string  resource_name  )

private

Definition at line 260 of file RequestPDB.cs.

References Molecule.Model.Reaction.acount, Molecule.Model.Reaction.affichage, Molecule.Model.Reaction.coord, Molecule.Model.Reaction.count, Molecule.Model.Reaction.current, Molecule.Model.Reaction.forward, Molecule.Model.Reaction.isReaction, and Molecule.Model.MoleculeModel.Offset.

void ParseData.ParsePDB.RequestPDB.ReadXGMML

(

String

xml_content

)

Definition at line 535 of file RequestPDB.cs.

References Molecule.Model.MoleculeModel.atomsLocationlist, Molecule.Model.MoleculeModel.atomsnumber, Molecule.Model.MoleculeModel.atomsResnamelist, Molecule.Model.MoleculeModel.atomsTypelist, Molecule.Model.MoleculeModel.bondEPList, Molecule.Model.MoleculeModel.bondsnumber, Molecule.Model.MoleculeModel.cameraLocation, Molecule.Control.ControlMolecule.CreateBondsCSList(), Molecule.Model.MoleculeModel.CSColorList, Molecule.Model.MoleculeModel.CSidList, Molecule.Model.MoleculeModel.CSLabelList, Molecule.Model.MoleculeModel.CSRadiusList, Molecule.Model.MoleculeModel.CSSGDList, UI.GUIMoleculeController.depthfactor, Molecule.Model.AtomModel.GetModel(), Molecule.Model.MoleculeModel.MaxValue, Molecule.Model.MoleculeModel.MinValue, Molecule.Model.MoleculeModel.networkLoaded, Molecule.Model.MoleculeModel.Offset, and Molecule.Model.MoleculeModel.target.

Here is the call graph for this function:

static List<int> ParseData.ParsePDB.RequestPDB.sortResIndex ( List< string >  resChainList )

static

Definition at line 219 of file RequestPDB.cs.

void ParseData.ParsePDB.RequestPDB.Start ( )

private

Definition at line 105 of file RequestPDB.cs.

void ParseData.ParsePDB.RequestPDB.Update ( )

private

Definition at line 113 of file RequestPDB.cs.

Member Data Documentation

bool ParseData.ParsePDB.RequestPDB.isDone =false

static

Definition at line 94 of file RequestPDB.cs.

Referenced by Molecule3D.clearScene().

bool ParseData.ParsePDB.RequestPDB.Loading = true

Definition at line 95 of file RequestPDB.cs.

float ParseData.ParsePDB.RequestPDB.progress =0.0f

The progress of loading a file

A float measuring the percent of progress of a file loading

Definition at line 93 of file RequestPDB.cs.

bool ParseData.ParsePDB.RequestPDB.wantdx =false

private

Definition at line 102 of file RequestPDB.cs.

bool ParseData.ParsePDB.RequestPDB.wantjson =false

private

Definition at line 103 of file RequestPDB.cs.

bool ParseData.ParsePDB.RequestPDB.wantobj =false

private

Definition at line 101 of file RequestPDB.cs.

---

The documentation for this class was generated from the following file:

• Assets/Scripts/ParseData/ParsePDB/RequestPDB.cs