Reaction.cs

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namespace Molecule.Model
{   
    using UnityEngine;
    using System.Collections;
    //Aurelien : class containing additional data needed for a reaction
    public class Reaction
    {
        public static ArrayList coord = new ArrayList();//Contains arraylists containing coordinates for all atoms (float[3])
        public static int[] CatomsIndList;//Used to keep the C atoms information when reading animation files
        public static int Catomscount = 0;//Same as above
        public static bool isReaction = false;//Used in the Update method in Molecule3D to identify that a reaction has to be done
        public static int count;//Number of steps of the reaction
        public static int acount;//Number of atoms involved in the reaction
        public static int current = 0;//Current step in the reaction, Reaction.current is incremented after the atoms' coordinates changes
        public static bool isReady = false;//Used to know when the atoms' GameObjects are created and can be used
        public static bool affichage = false;//Used to set atom and bond types to hyperball/hyperstick in Molecule3D.Update()
        public static bool forward = true;//Used to know whether the reaction is animated backwards or not
        public static bool top = false;//Used to determine whether a top file has been read or not (changes a button in the animation menu)
        public static bool animation = false;//Used to determine whether there is a animation or not
    
        public Reaction()
        {

        }
    }
}