Stores the bonds of the model as a dictionary of <UnityMolAtom, UnityMolAtom[]> More...

Public Member Functions
	UnityMolBonds ()
	UnityMolBonds constructor initializing the dictionary More...

void	Add (UnityMolAtom atom, UnityMolAtom[] bonded)
	Add an array of atoms in the dictionary More...

void	Add (UnityMolAtom atom, UnityMolAtom bonded)
	Add a UnityMolAtom in the dictionary, prints a Debug.LogError when no more space is available More...

int	countBondedAtoms (UnityMolAtom a)
	Returns the number of atoms bonded to the atom A More...

bool	isBondedTo (UnityMolAtom a1, UnityMolAtom a2)
	Check if atom a1 and atom a2 are bonded More...

List< AtomDuo >	ToList ()
	Return a flatten list of atom couples (not from the dual dictionary) More...

Public Attributes
int	NBBONDS = 12
	Number of bonds per atom, this should change if a Martini model is parsed More...

Dictionary< UnityMolAtom, UnityMolAtom[]>	bonds
	Stores the bonds of the model, empty bonds are null More...

Dictionary< UnityMolAtom, UnityMolAtom[]>	bondsDual
	Stores the bonds of the model, empty bonds are null, contains both A1+A2 and A2+A1 More...

int	bondsCount = 0
	Total number of bonds stored More...

Properties
int	Count `[get]`
	Returns the number of bonds stored More...

int	Length `[get]`

Dictionary< UnityMolAtom, UnityMolAtom[]>	Dbonds `[get]`
	Returns the number of bonds stored More...

Detailed Description

Stores the bonds of the model as a dictionary of <UnityMolAtom, UnityMolAtom[]>

Constructor & Destructor Documentation

◆ UnityMolBonds()

UMol.UnityMolBonds.UnityMolBonds ( )

UnityMolBonds constructor initializing the dictionary

Member Function Documentation

◆ Add() [1/2]

void UMol.UnityMolBonds.Add	(	UnityMolAtom	atom,
		UnityMolAtom []	bonded
	)

Add an array of atoms in the dictionary

◆ Add() [2/2]

void UMol.UnityMolBonds.Add	(	UnityMolAtom	atom,
		UnityMolAtom	bonded
	)

Add a UnityMolAtom in the dictionary, prints a Debug.LogError when no more space is available

◆ countBondedAtoms()

int UMol.UnityMolBonds.countBondedAtoms ( UnityMolAtom a )

Returns the number of atoms bonded to the atom A

◆ isBondedTo()

bool UMol.UnityMolBonds.isBondedTo	(	UnityMolAtom	a1,
		UnityMolAtom	a2
	)

Check if atom a1 and atom a2 are bonded

◆ ToList()

List<AtomDuo> UMol.UnityMolBonds.ToList ( )

Return a flatten list of atom couples (not from the dual dictionary)

Member Data Documentation

◆ bonds

Dictionary<UnityMolAtom, UnityMolAtom[]> UMol.UnityMolBonds.bonds

Stores the bonds of the model, empty bonds are null

◆ bondsCount

int UMol.UnityMolBonds.bondsCount = 0

Total number of bonds stored

◆ bondsDual

Dictionary<UnityMolAtom, UnityMolAtom[]> UMol.UnityMolBonds.bondsDual

Stores the bonds of the model, empty bonds are null, contains both A1+A2 and A2+A1

◆ NBBONDS

int UMol.UnityMolBonds.NBBONDS = 12

Number of bonds per atom, this should change if a Martini model is parsed

Property Documentation

◆ Count

int UMol.UnityMolBonds.Count

get

Returns the number of bonds stored

◆ Dbonds

Dictionary<UnityMolAtom, UnityMolAtom[]> UMol.UnityMolBonds.Dbonds

get