Part of the SMCRA data structure, UnityMolAtom stores atom informations of the structure More...

Public Member Functions
	UnityMolAtom (string _name, string _type, Vector3 _pos, float _bfact, long _number, bool _isHET=false)
	UnityMolAtom constructor taking all atom informations as arg, calls setAtomRepresentation() More...

void	SetResidue (UnityMolResidue r)

void	SetAtomRepresentationModel (string prefix)
	Set representation regarding the model (OPEP, HiRE-RNA, Martini or all-atom) More...

override string	ToString ()
	Atom string representation More...

UnityMolAtom	Clone ()
	Clone a UnityMolAtom Keep modified elements like position / color ... More...

UnityMolSelection	ToSelection ()

int	getLightHashCode ()

Public Attributes
UnityMolResidue	residue
	Store the reference to the residue it belongs to More...

string	name
	Name of the atom More...

Vector3	position
	Position of the atom, model centered on (0,0,0) More...

Vector3	oriPosition
	Position of the atom without offset, from the input file More...

float	bfactor
	Bfactor of the atom More...

string	type
	Atom type More...

bool	isHET
	Is this atom a hetero atom More...

bool	isLigand
	Is this atom a ligand atom More...

long	number
	Atom number More...

float	radius
	Representation default radius of the atom (Van der Walls) More...

float	scale
	Representation scale More...

Color	color
	Representation color More...

string	texture
	Representation texture More...

int	idInAllAtoms = -1
	Index of this atom in the model.allAtoms list More...

Properties
Vector4	PositionVec4 `[get]`
	Position accessor as a Vector4 More...

Vector3	curWorldPosition `[get]`

GameObject	correspondingGo `[get]`

Detailed Description

Part of the SMCRA data structure, UnityMolAtom stores atom informations of the structure

Constructor & Destructor Documentation

◆ UnityMolAtom()

UMol.UnityMolAtom.UnityMolAtom	(	string	_name,
		string	_type,
		Vector3	_pos,
		float	_bfact,
		long	_number,
		bool	_isHET = `false`
	)

UnityMolAtom constructor taking all atom informations as arg, calls setAtomRepresentation()

Member Function Documentation

◆ Clone()

UnityMolAtom UMol.UnityMolAtom.Clone ( )

Clone a UnityMolAtom Keep modified elements like position / color ...

◆ getLightHashCode()

int UMol.UnityMolAtom.getLightHashCode ( )

◆ SetAtomRepresentationModel()

void UMol.UnityMolAtom.SetAtomRepresentationModel ( string prefix )

Set representation regarding the model (OPEP, HiRE-RNA, Martini or all-atom)

◆ SetResidue()

void UMol.UnityMolAtom.SetResidue ( UnityMolResidue r )

◆ ToSelection()

UnityMolSelection UMol.UnityMolAtom.ToSelection ( )

◆ ToString()

override string UMol.UnityMolAtom.ToString ( )

Atom string representation

Member Data Documentation

◆ bfactor

float UMol.UnityMolAtom.bfactor

Bfactor of the atom

◆ color

Color UMol.UnityMolAtom.color

Representation color

◆ idInAllAtoms

int UMol.UnityMolAtom.idInAllAtoms = -1

Index of this atom in the model.allAtoms list

◆ isHET

bool UMol.UnityMolAtom.isHET

Is this atom a hetero atom

◆ isLigand

bool UMol.UnityMolAtom.isLigand

Is this atom a ligand atom

◆ name

string UMol.UnityMolAtom.name

Name of the atom

◆ number

long UMol.UnityMolAtom.number

Atom number

◆ oriPosition

Vector3 UMol.UnityMolAtom.oriPosition

Position of the atom without offset, from the input file

◆ position

Vector3 UMol.UnityMolAtom.position

Position of the atom, model centered on (0,0,0)

◆ radius

float UMol.UnityMolAtom.radius

Representation default radius of the atom (Van der Walls)

◆ residue

UnityMolResidue UMol.UnityMolAtom.residue

Store the reference to the residue it belongs to

◆ scale

float UMol.UnityMolAtom.scale

Representation scale

◆ texture

string UMol.UnityMolAtom.texture

Representation texture

◆ type

string UMol.UnityMolAtom.type

Atom type

Property Documentation

◆ correspondingGo

GameObject UMol.UnityMolAtom.correspondingGo

get

◆ curWorldPosition

Vector3 UMol.UnityMolAtom.curWorldPosition

get

◆ PositionVec4

Vector4 UMol.UnityMolAtom.PositionVec4

get

Position accessor as a Vector4

The documentation for this class was generated from the following file:

C:/Users/Xavier/Dev/UnityMolX/Assets/Scripts/SMCRA/UnityMolAtom.cs

Public Member Functions

Public Attributes

Properties