UnityMol  1.0.25beta
UMol.NucleicBaseSelection Class Reference
Inheritance diagram for UMol.NucleicBaseSelection:
UMol.MDASelection UMol.MetaClass

Public Member Functions

 NucleicBaseSelection (MDAnalysisSelection mda, string t, int p)
 
 NucleicBaseSelection (NucleicBaseSelection cpy)
 
override void init (List< string > tokens, ref int curId)
 
override HashSet< UnityMolAtomapply (HashSet< UnityMolAtom > group)
 
override MetaClass Clone ()
 
- Public Member Functions inherited from UMol.MDASelection
 MDASelection (MDAnalysisSelection mda, string t, int p)
 
 MDASelection (MDASelection cpy)
 
- Public Member Functions inherited from UMol.MetaClass
 MetaClass ()
 
 MetaClass (MetaClass cpy)
 

Static Public Attributes

static HashSet< string > knownNucleicBases
 

Additional Inherited Members

- Public Attributes inherited from UMol.MetaClass
MDAnalysisSelection mdaSel
 
string token
 
int precedence
 

Constructor & Destructor Documentation

◆ NucleicBaseSelection() [1/2]

UMol.NucleicBaseSelection.NucleicBaseSelection ( MDAnalysisSelection  mda,
string  t,
int  p 
)

◆ NucleicBaseSelection() [2/2]

UMol.NucleicBaseSelection.NucleicBaseSelection ( NucleicBaseSelection  cpy)

Member Function Documentation

◆ apply()

override HashSet<UnityMolAtom> UMol.NucleicBaseSelection.apply ( HashSet< UnityMolAtom group)
virtual

Implements UMol.MetaClass.

◆ Clone()

override MetaClass UMol.NucleicBaseSelection.Clone ( )
virtual

Implements UMol.MetaClass.

◆ init()

override void UMol.NucleicBaseSelection.init ( List< string >  tokens,
ref int  curId 
)
virtual

Implements UMol.MDASelection.

Member Data Documentation

◆ knownNucleicBases

HashSet<string> UMol.NucleicBaseSelection.knownNucleicBases
static
Initial value:
= new HashSet<string> {
"N9", "N7", "C8", "C5", "C4", "N3", "C2", "N1", "C6",
"O6", "N2", "N6",
"O2", "N4", "O4", "C5M"
}

The documentation for this class was generated from the following file: