UMol.IonsSelection Class Reference

Inheritance diagram for UMol.IonsSelection:

Public Member Functions
	IonsSelection (MDAnalysisSelection mda, string t, int p)
	IonsSelection (IonsSelection cpy)
override void	init (List< string > tokens, ref int curId)
override HashSet< UnityMolAtom >	apply (HashSet< UnityMolAtom > group)
override MetaClass	Clone ()
Public Member Functions inherited from UMol.MDASelection
	MDASelection (MDAnalysisSelection mda, string t, int p)
	MDASelection (MDASelection cpy)
Public Member Functions inherited from UMol.MetaClass
	MetaClass ()
	MetaClass (MetaClass cpy)

Static Public Attributes
static HashSet< string >	ionNames
static HashSet< string >	ionResidueNames
static HashSet< string >	specialHG
static HashSet< string >	specialCL

Additional Inherited Members
Public Attributes inherited from UMol.MetaClass
MDAnalysisSelection	mdaSel
string	token
int	precedence

Constructor & Destructor Documentation

IonsSelection() [1/2]

UMol.IonsSelection.IonsSelection	(	MDAnalysisSelection	mda,
		string	t,
		int	p
	)

IonsSelection() [2/2]

UMol.IonsSelection.IonsSelection

(

IonsSelection

cpy

)

Member Function Documentation

apply()

override HashSet<UnityMolAtom> UMol.IonsSelection.apply ( HashSet< UnityMolAtom >  group )

virtual

Implements UMol.MetaClass.

Clone()

override MetaClass UMol.IonsSelection.Clone ( )

virtual

Implements UMol.MetaClass.

init()

override void UMol.IonsSelection.init ( List< string >  tokens, ref int  curId  )

virtual

Implements UMol.MDASelection.

Member Data Documentation

ionNames

HashSet<string> UMol.IonsSelection.ionNames

static

Initial value:

= new HashSet<string> {
        "AL", "AS", "AU", "BE", "BR", "CO", "CU", "EU", "FE", "GD", "IR",
        "MG", "MN", "MO", "NI", "PT", "RH", "RU", "SE", "TA", "ZN"
        
        
        
        
    }

ionResidueNames

HashSet<string> UMol.IonsSelection.ionResidueNames

static

Initial value:

= new HashSet<string> {
        "PO4", "SOD", "SO4", "NH4"
    }

specialCL

HashSet<string> UMol.IonsSelection.specialCL

static

Initial value:

= new HashSet<string> {
        "0QE", "CPT", "DCE", "EAA", "IMN", "OCZ", "OMY", "OMZ",
        "UN9", "1N1", "2T8", "393", "3MY", "BMU", "CLM", "CP6",
        "DB8", "DIF", "EFZ", "LUR", "RDC", "UCL", "XMM", "HLT",
        "IRE", "LCP", "PCI", "VGH"
    }

specialHG

HashSet<string> UMol.IonsSelection.specialHG

static

Initial value:

= new HashSet<string> {
        "CMH", "EMC", "MBO", "MMC", "HGB", "BE7", "PMB"
    }

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The documentation for this class was generated from the following file:

• C:/Users/Xavier/Dev/UnityMolX/Assets/Scripts/SelectionMDAnalysis/MDAnalysisSelection.cs