GenerateMesh Class Reference

Public Member Functions
void	GM (Vector3[] Mvertices, int[] Mtriangles, Vector3 center, int surfaceNb, Color[] Colors)

Static Public Member Functions
static void	CreateSurfaceObjects (float[,,] voxels, float threshold, Vector3 delta, Vector3 origin, Color[] colors, int isPos, bool electro=false)

Static Private Member Functions
static void	ProperlyCalculateNormals (MeshData mData)
static Mesh	GenerateTextureCoordinates (Mesh mesh)
static Mesh	CalculateMeshTangents (Mesh mesh)
static void	FlipTriangles (MeshData mData)
static void	FlipNormals (MeshData mData)
static void	OffsetVertices (MeshData mData)
static void	CreateSurfaceObjects (List< Mesh > meshes, int isPos)
static void	SetDims ()
static void	DebugDims ()
static void	InitGenMesh (float[,,] vox, float thresh, Vector3 d, Vector3 o)

Static Private Attributes
static Vector3	CENTER = new Vector3(0f,0f,0f)
static float[,,]	VOXELS
static Vector3	DELTA
static Vector3	ORIGIN
static Vector3	OFFSET_ORIGIN
static Transform	DADDY
static string	TAG
static int	XDIM
static int	YDIM
static int	ZDIM
static int	SLICE_WIDTH = 80
static float	S_FUDGE_FACTOR = 18f
static Vector3	FUDGE_FACTOR = new Vector3(S_FUDGE_FACTOR, S_FUDGE_FACTOR, S_FUDGE_FACTOR)
static bool	ELECTRO = false

Detailed Description

Definition at line 72 of file GenerateMesh.cs.

Member Function Documentation

static Mesh GenerateMesh.CalculateMeshTangents ( Mesh  mesh )

staticprivate

Definition at line 159 of file GenerateMesh.cs.

static void GenerateMesh.CreateSurfaceObjects ( List< Mesh >  meshes, int  isPos  )

staticprivate

Definition at line 299 of file GenerateMesh.cs.

References SurfaceManager.addSurface(), SurfaceManager.addSurfaceNeg(), SurfaceManager.addSurfacePos(), CENTER, DADDY, and UnityMolMain.getSurfaceManager().

Referenced by CreateSurfaceObjects(), ReadDX.isoSurface(), and PDBtoDEN.ProSurface().

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static void GenerateMesh.CreateSurfaceObjects ( float  voxels[,,], float  threshold, Vector3  delta, Vector3  origin, Color[]  colors, int  isPos, bool  electro = false  )

static

Creates the surface objects.

Parameters

voxels	Voxels, i.e. the scalar field used to compute the surface.
threshold	The threshold on which the isosurface is based.
delta	Delta parameter from the grid, basically the size of each cell.
origin	Origin of the grid.
colors	Colors. Kept from previous implementation, but doesn't do anything here. I'm only keeping it because I'm not sure what it was used for. — Alexandre
tag	Tag for the objects to be created.
electro	True if this is an electrostatic field isosurface.

Definition at line 382 of file GenerateMesh.cs.

References AdjacencySets.AddAllTriangles(), SmoothFilter.AdjSetsSmoother(), MarchingCubes.CreateMesh(), CreateSurfaceObjects(), FlipTriangles(), ReadDX.GetDelta(), ReadDX.GetOrigin(), InitGenMesh(), OffsetVertices(), ProperlyCalculateNormals(), ElectrostaticManager.readdx, SetDims(), Splitting.Split(), MeshData.triangles, and MeshData.vertices.

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static void GenerateMesh.DebugDims ( )

staticprivate

Definition at line 337 of file GenerateMesh.cs.

static void GenerateMesh.FlipNormals ( MeshData  mData )

staticprivate

Definition at line 244 of file GenerateMesh.cs.

References MeshData.normals.

static void GenerateMesh.FlipTriangles ( MeshData  mData )

staticprivate

Definition at line 232 of file GenerateMesh.cs.

References MeshData.triangles.

Referenced by CreateSurfaceObjects().

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static Mesh GenerateMesh.GenerateTextureCoordinates ( Mesh  mesh )

staticprivate

Definition at line 147 of file GenerateMesh.cs.

void GenerateMesh.GM	(	Vector3[]	Mvertices,
		int[]	Mtriangles,
		Vector3	center,
		int	surfaceNb,
		Color[]	Colors
	)

Definition at line 422 of file GenerateMesh.cs.

References SurfaceManager.addSurface(), SurfaceManager.getParentGameObject(), UnityMolMain.getSurfaceManager(), and Molecule.Model.MoleculeModel.vertices.

Referenced by MarchingCubesRec.MarchOneCube(), MarchingCubesRec.MarchOneCube_2(), MarchingCubesRec.MarchOneCube_2_Rev(), MarchingCubesRec.MarchOneCube_Rev(), and MarchingCubesRec.MCRecMain().

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static void GenerateMesh.InitGenMesh ( float  vox[,,], float  thresh, Vector3  d, Vector3  o  )

staticprivate

Definition at line 345 of file GenerateMesh.cs.

References SurfaceManager.getParentGameObject(), UnityMolMain.getSurfaceManager(), ORIGIN, MarchingCubes.SetModeToCubes(), and MarchingCubes.SetTarget().

Referenced by CreateSurfaceObjects().

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static void GenerateMesh.OffsetVertices ( MeshData  mData )

staticprivate

Definition at line 253 of file GenerateMesh.cs.

References OFFSET_ORIGIN, and MeshData.vertices.

Referenced by CreateSurfaceObjects().

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static void GenerateMesh.ProperlyCalculateNormals ( MeshData  mData )

staticprivate

This computes the normal vectors from a MeshData object, and adds them to it.

This is necessary because Unity3D can only do it for real Mesh objects, but this creates artifacts at the edges when said meshes are created by splitting a surface.

Parameters

mData

The MeshData object to which normals will be added.

Definition at line 96 of file GenerateMesh.cs.

References MeshData.normals, MeshData.triangles, and MeshData.vertices.

Referenced by CreateSurfaceObjects().

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static void GenerateMesh.SetDims ( )

staticprivate

Definition at line 331 of file GenerateMesh.cs.

Referenced by CreateSurfaceObjects().

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Member Data Documentation

Vector3 GenerateMesh.CENTER = new Vector3(0f,0f,0f)

staticprivate

Definition at line 74 of file GenerateMesh.cs.

Referenced by CreateSurfaceObjects().

Transform GenerateMesh.DADDY

staticprivate

Definition at line 79 of file GenerateMesh.cs.

Referenced by CreateSurfaceObjects().

Vector3 GenerateMesh.DELTA

staticprivate

Definition at line 76 of file GenerateMesh.cs.

bool GenerateMesh.ELECTRO = false

staticprivate

Definition at line 85 of file GenerateMesh.cs.

Vector3 GenerateMesh.FUDGE_FACTOR = new Vector3(S_FUDGE_FACTOR, S_FUDGE_FACTOR, S_FUDGE_FACTOR)

staticprivate

Definition at line 84 of file GenerateMesh.cs.

Vector3 GenerateMesh.OFFSET_ORIGIN

staticprivate

Definition at line 78 of file GenerateMesh.cs.

Referenced by OffsetVertices().

Vector3 GenerateMesh.ORIGIN

staticprivate

Definition at line 77 of file GenerateMesh.cs.

Referenced by InitGenMesh().

float GenerateMesh.S_FUDGE_FACTOR = 18f

staticprivate

Definition at line 83 of file GenerateMesh.cs.

int GenerateMesh.SLICE_WIDTH = 80

staticprivate

Definition at line 82 of file GenerateMesh.cs.

string GenerateMesh.TAG

staticprivate

Definition at line 80 of file GenerateMesh.cs.

float [,,] GenerateMesh.VOXELS

staticprivate

Definition at line 75 of file GenerateMesh.cs.

int GenerateMesh.XDIM

staticprivate

Definition at line 81 of file GenerateMesh.cs.

int GenerateMesh.YDIM

staticprivate

Definition at line 81 of file GenerateMesh.cs.

int GenerateMesh.ZDIM

staticprivate

Definition at line 81 of file GenerateMesh.cs.

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The documentation for this class was generated from the following file:

• Assets/Scripts/Surface-Electrostatic/GenerateMesh.cs