atomsLocationlist | SugarRibbons | |
atomsNamelist | SugarRibbons | |
atomsResnamelist | SugarRibbons | |
barylist | SugarRibbons | |
BONDCOLOR | SugarRibbons | |
bondEPList | SugarRibbons | |
calcMidPoint(Vector3 a, Vector3 b) | SugarRibbons | |
CalculBarycenter() | SugarRibbons | private |
calcullittleRibbonsControlPoint(Vector3 a, Vector3 b, float size=0.7f) | SugarRibbons | private |
calculMeanNormalMesh(Mesh mesh) | SugarRibbons | private |
calculMeshBarycenter(Mesh mesh) | SugarRibbons | private |
calculMidPoint(Vector3 a, Vector3 b) | SugarRibbons | private |
CHAIN | SugarRibbons | |
changeColor(int which) | SugarRibbons | |
cleanup() | SugarRibbons | |
COLOR_MODE_BOND | SugarRibbons | |
COLOR_MODE_RING | SugarRibbons | |
colors | SugarRibbons | |
connectivityList | SugarRibbons | |
create_Bond() | SugarRibbons | private |
createDebugSphere(Vector3 point, Color color, float size=1f) | SugarRibbons | private |
CreateOxygenSphere(int pos, int res, int sugartype=0) | SugarRibbons | |
createSugarRibbons() | SugarRibbons | |
CreateSugarRibbonsObj(Mesh mesh, string res="", string chain="", string tag="SugarRibbons", int id=0) | SugarRibbons | |
createSugarRibs(float RibbonsThickness, bool sugarOnly, float thickness_Little, float thickness_BIG, float thickness_bond_6_C1_C4, float thickness_6_other, float thickness_bond_5, float lighter_color_factor_ring, float lighter_color_factor_bond, int color_mode_ring, int color_mode_bond, ColorObject bondcolor, ColorObject ringcolor, float OxySphereSize, ColorObject OxySphereColor) | SugarRibbons | |
CycleAtomToVector3(int index_res, int number) | SugarRibbons | private |
CycleBIGMesh | SugarRibbons | |
CycleMesh | SugarRibbons | |
cycles | SugarRibbons | |
debugline(Vector3 a, Vector3 b) | SugarRibbons | private |
enlargeMesh(int i, float scaling) | SugarRibbons | |
findRingAtomIndex(int ringIndex, int AtomNumber) | SugarRibbons | private |
float3toVector3(float[] point) | SugarRibbons | private |
generateBiggerCycleMesh(float scaling=0.60f) | SugarRibbons | private |
generateCycleMesh2() | SugarRibbons | private |
generateRibbonsMesh(Mesh centralMesh, int resnumber, float thicknessCenter=1f, bool center=true) | SugarRibbons | private |
generateTriangleSide(Mesh mesh) | SugarRibbons | private |
invertTrianglesMesh(Mesh mesh) | SugarRibbons | private |
lightColor(Color color, float correctionFactor=0.35f) | SugarRibbons | |
LIGHTER_COLOR_FACTOR_BOND | SugarRibbons | |
LIGHTER_COLOR_FACTOR_RING | SugarRibbons | |
LinearComb(float scalar0, Vector3 vector0, float scalar1, Vector3 vector1) | SugarRibbons | private |
makeFlatVertex(List< Vector3 > verticeEn) | SugarRibbons | private |
meshesBIGRingDown | SugarRibbons | |
meshesBIGRingUp | SugarRibbons | |
meshesBIGSideRing | SugarRibbons | |
meshesBondDown | SugarRibbons | |
meshesBondSide | SugarRibbons | |
meshesBondUp | SugarRibbons | |
meshesRingDown | SugarRibbons | |
meshesRingUp | SugarRibbons | |
meshesSideRing | SugarRibbons | |
MeshIndexForAtom | SugarRibbons | |
molAsGraph | SugarRibbons | |
nbRes | SugarRibbons | |
normals | SugarRibbons | |
OXYSPHERECOLOR | SugarRibbons | |
OXYSPHERESIZE | SugarRibbons | |
PICKER | SugarRibbons | |
res_for_bond | SugarRibbons | |
resChainList | SugarRibbons | |
residueslist | SugarRibbons | |
residuesNumberlist | SugarRibbons | |
RINGCOLOR | SugarRibbons | |
ShowOxySphere(int colortype) | SugarRibbons | |
Solve(Mesh mesh) | SugarRibbons | static |
SUGAR | SugarRibbons | |
SUGAR_ONLY | SugarRibbons | |
sugarResname | SugarRibbons | |
SugarRibbons(bool SugarOnly) | SugarRibbons | |
THICKNESS | SugarRibbons | |
THICKNESS_BIG_MESH | SugarRibbons | |
THICKNESS_BOND_5 | SugarRibbons | |
THICKNESS_BOND_6_C1_C4 | SugarRibbons | |
THICKNESS_BOND_6_OTHER | SugarRibbons | |
THICKNESS_LITTLE_MESH | SugarRibbons | |
triangles | SugarRibbons | |
updateColorBond(List< GameObject > objs, ColorObject newColor) | SugarRibbons | |
updateColorBond(List< GameObject > objs, int type) | SugarRibbons | |
updateColorRing(List< GameObject > objs, ColorObject newColor) | SugarRibbons | |
updateColorRing(List< GameObject > objs, int type) | SugarRibbons | |
vertices | SugarRibbons | |
wideness | SugarRibbons | static |